Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | C4F17_RS04150 | Not Available | Positive | 895442 - 896659 | 43168.8 |
| alpha/beta hydrolase family protein | C4F17_RS04155 | Not Available | Negative | 896677 - 898206 | 53716.1 |
| transglutaminase n-terminal domain-containing protein | C4F17_RS04160 | Not Available | Negative | 898405 - 899313 | 33684.9 |
| antibiotic biosynthesis monooxygenase family protein | C4F17_RS04165 | Not Available | Positive | 899436 - 899768 | 12483.6 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C4F17_RS04170 | Not Available | Negative | 899792 - 901633 | 65467.9 |
| oxidative damage protection protein | C4F17_RS04180 | Not Available | Negative | 901755 - 902027 | 10308.4 |
| sulfate abc transporter substrate-binding protein | C4F17_RS04185 | Not Available | Positive | 902165 - 903205 | 37600.8 |
| nadph-dependent fmn reductase | C4F17_RS04190 | Not Available | Positive | 903342 - 903926 | 20851.4 |
| hypothetical protein | C4F17_RS33095 | Not Available | Positive | 904050 - 904187 | 4563.52 |
| sulfonate abc transporter substrate-binding protein | C4F17_RS04195 | Not Available | Positive | 904219 - 905175 | 33561.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
