Pseudomonas sp. LBUM920

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LBUM920 is characterized by possessing a single replicon, indicating a streamlined genetic structure. The genome accession for this strain is NZ_CP027762.1, which provides a reference point for genomic studies and comparative analysis within the Pseudomonas genus. The traits associated with Pseudomonas sp. LBUM920 suggest a potential for adaptability and resilience in various environments, typical of many Pseudomonas species. This adaptability is commonly linked to their metabolic versatility, allowing them to thrive in diverse ecological niches, including soil, water, and plant surfaces. The ecological insights derived from studying such strains like Pseudomonas sp. LBUM920 are significant. Given the well-documented capabilities of Pseudomonas species in bioremediation and plant growth promotion, LBUM920 may also possess similar traits, contributing to nutrient cycling and the degradation of pollutants in its environment. Understanding the genetic and metabolic pathways of this strain can illuminate its role in ecosystem functioning and its potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LBUM920
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LBUM920
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LBUM920 chromosome, complete genome.

Gene Summary

Adenine Count

1280099 bp

Thymine Count

1287948 bp

Guanine Count

1983785 bp

Cytosine Count

1982034 bp

Genome Length

6533866 bp

Protein-coding Genes

5716 genes

Non-Coding Genes

240 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporter substrate-binding domain-containing proteinC4J83_RS01865Not AvailablePositive426598 - 42739529687.0
amino acid abc transporter permeaseC4J83_RS01870Not AvailablePositive427519 - 42847835031.8
amino acid abc transporter atp-binding proteinC4J83_RS01875Not AvailablePositive428471 - 42920526873.8
methyl-accepting chemotaxis proteinC4J83_RS30965Not AvailableNegative429401 - 43027330404.5
rhs repeat domain-containing proteinC4J83_RS30970Not AvailableNegative430307 - 43131736506.7
16s rrna (uracil(1498)-n(3))-methyltransferaseC4J83_RS01885Not AvailableNegative431649 - 43235626008.3
twin-arginine translocase subunit tatcC4J83_RS01890Not AvailableNegative432353 - 43314429340.7
sec-independent protein translocase protein tatbC4J83_RS01895Not AvailableNegative433141 - 43357215199.4
twin-arginine translocase tata/tate family subunitC4J83_RS01900Not AvailableNegative433583 - 43387310741.0
phosphoribosyl-atp diphosphataseC4J83_RS01905Not AvailableNegative433899 - 43423112015.1

Displaying genes 561 – 570 of 5956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.