Pseudomonas sp. LBUM920

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LBUM920 is characterized by possessing a single replicon, indicating a streamlined genetic structure. The genome accession for this strain is NZ_CP027762.1, which provides a reference point for genomic studies and comparative analysis within the Pseudomonas genus. The traits associated with Pseudomonas sp. LBUM920 suggest a potential for adaptability and resilience in various environments, typical of many Pseudomonas species. This adaptability is commonly linked to their metabolic versatility, allowing them to thrive in diverse ecological niches, including soil, water, and plant surfaces. The ecological insights derived from studying such strains like Pseudomonas sp. LBUM920 are significant. Given the well-documented capabilities of Pseudomonas species in bioremediation and plant growth promotion, LBUM920 may also possess similar traits, contributing to nutrient cycling and the degradation of pollutants in its environment. Understanding the genetic and metabolic pathways of this strain can illuminate its role in ecosystem functioning and its potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LBUM920
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LBUM920
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LBUM920 chromosome, complete genome.

Gene Summary

Adenine Count

1280099 bp

Thymine Count

1287948 bp

Guanine Count

1983785 bp

Cytosine Count

1982034 bp

Genome Length

6533866 bp

Protein-coding Genes

5716 genes

Non-Coding Genes

240 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase family protein molybdopterin-binding subunitC4J83_RS26215Not AvailableNegative5661268 - 566345178564.5
fad binding domain-containing proteinC4J83_RS26220Not AvailableNegative5663448 - 566443735368.3
(2fe-2s)-binding proteinC4J83_RS26225Not AvailableNegative5664434 - 566495818497.1
duf4879 domain-containing proteinC4J83_RS26230Not AvailableNegative5665055 - 566549815414.6
ncs2 family permeaseC4J83_RS26235Not AvailablePositive5665709 - 566700444922.4
trna (uridine(54)-c5)-methyltransferase trmaC4J83_RS26240Not AvailablePositive5667001 - 566808040703.4
type ii 3-dehydroquinate dehydrataseC4J83_RS26245Not AvailablePositive5668264 - 566870415830.0
shikimate dehydrogenaseC4J83_RS26250Not AvailablePositive5668710 - 566955830370.8
tetr/acrr family transcriptional regulatorC4J83_RS26255Not AvailableNegative5669685 - 567035025587.5
3-dehydroshikimate dehydratase quicC4J83_RS26260Not AvailableNegative5670432 - 567233370163.3

Displaying genes 5141 – 5150 of 5956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.