Pseudomonas sp. LBUM920

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LBUM920 is characterized by possessing a single replicon, indicating a streamlined genetic structure. The genome accession for this strain is NZ_CP027762.1, which provides a reference point for genomic studies and comparative analysis within the Pseudomonas genus. The traits associated with Pseudomonas sp. LBUM920 suggest a potential for adaptability and resilience in various environments, typical of many Pseudomonas species. This adaptability is commonly linked to their metabolic versatility, allowing them to thrive in diverse ecological niches, including soil, water, and plant surfaces. The ecological insights derived from studying such strains like Pseudomonas sp. LBUM920 are significant. Given the well-documented capabilities of Pseudomonas species in bioremediation and plant growth promotion, LBUM920 may also possess similar traits, contributing to nutrient cycling and the degradation of pollutants in its environment. Understanding the genetic and metabolic pathways of this strain can illuminate its role in ecosystem functioning and its potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LBUM920
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LBUM920
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LBUM920 chromosome, complete genome.

Gene Summary

Adenine Count

1280099 bp

Thymine Count

1287948 bp

Guanine Count

1983785 bp

Cytosine Count

1982034 bp

Genome Length

6533866 bp

Protein-coding Genes

5716 genes

Non-Coding Genes

240 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuokC4J83_RS18430Not AvailablePositive3977171 - 397747910968.0
nadh-quinone oxidoreductase subunit lC4J83_RS18435Not AvailablePositive3977476 - 397932966501.5
nadh-quinone oxidoreductase subunit mC4J83_RS18440Not AvailablePositive3979379 - 398091155966.0
nadh-quinone oxidoreductase subunit nuonC4J83_RS18445Not AvailablePositive3980919 - 398238252020.5
rhs repeat domain-containing proteinC4J83_RS30810Not AvailablePositive3984247 - 39843644040.63
type vi secretion system-associated protein tagfC4J83_RS18460Not AvailableNegative3984405 - 398506424029.9
type vi secretion system membrane subunit tssmC4J83_RS18465Not AvailableNegative3985074 - 3988637129929.0
type ivb secretion system protein icmh/dotuC4J83_RS18470Not AvailableNegative3988640 - 398992646159.7
type vi secretion system baseplate subunit tsskC4J83_RS18475Not AvailableNegative3989942 - 399127349121.3
type vi secretion system-associated fha domain protein taghC4J83_RS18480Not AvailableNegative3991366 - 399279051841.1

Displaying genes 3611 – 3620 of 5956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.