Pseudomonas chlororaphis strain B25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain B25 is a Gram-negative, rod-shaped bacterium primarily found in the nodules of Chamaecytisus albus and the rhizosphere of various plants, including Brassica napus var. napus. This strain possesses a single replicon, indicating a streamlined genetic structure that is typical of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain B25 is significant, as it interacts with plant hosts in the Viridiplantae kingdom. This interaction suggests a potential for promoting plant health or influencing plant growth, which is a characteristic of many Pseudomonas species known for their beneficial effects in agricultural settings. Interestingly, while the strain is associated with plant hosts, it also demonstrates pathogenicity towards animals, indicating a complex life strategy that allows it to adapt to different environments and hosts. This dual ability highlights the ecological versatility of Pseudomonas chlororaphis strain B25. In summary, the presence of strain B25 in plant root nodules and its interactions with both plant and animal hosts underscore its potential role in ecological dynamics and its relevance in agricultural microbiology. Such traits may contribute to nutrient cycling and plant health, making it a subject of interest for further research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain B25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain B25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain B25 chromosome, complete genome.

Gene Summary

Adenine Count

1335624 bp

Thymine Count

1334168 bp

Guanine Count

2173770 bp

Cytosine Count

2173031 bp

Genome Length

7016593 bp

Protein-coding Genes

6219 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit alphaC4K04_RS29530Not AvailableNegative6417832 - 6420849109463.0
sarcosine oxidase subunit deltaC4K04_RS29535Not AvailableNegative6420846 - 642117512595.7
sarcosine oxidase subunit beta family proteinC4K04_RS29540Not AvailableNegative6421190 - 642244045278.1
serine hydroxymethyltransferaseC4K04_RS29545Not AvailableNegative6422464 - 642371744733.3
trax family proteinC4K04_RS29550Not AvailableNegative6424165 - 642490827819.3
low specificity l-threonine aldolaseC4K04_RS29555Not AvailablePositive6425133 - 642617338022.0
purine-cytosine permease family proteinC4K04_RS29560Not AvailablePositive6426341 - 642778651994.1
nitrilase-related carbon-nitrogen hydrolaseC4K04_RS29565Not AvailablePositive6427783 - 642860729668.7
sdr family oxidoreductaseC4K04_RS29570Not AvailablePositive6428746 - 642957029769.9
glycine-betaine demethylase subunit gbcbC4K04_RS29575Not AvailableNegative6429699 - 643079940503.5

Displaying genes 5891 – 5900 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.