Pseudomonas chlororaphis strain B25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain B25 is a Gram-negative, rod-shaped bacterium primarily found in the nodules of Chamaecytisus albus and the rhizosphere of various plants, including Brassica napus var. napus. This strain possesses a single replicon, indicating a streamlined genetic structure that is typical of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain B25 is significant, as it interacts with plant hosts in the Viridiplantae kingdom. This interaction suggests a potential for promoting plant health or influencing plant growth, which is a characteristic of many Pseudomonas species known for their beneficial effects in agricultural settings. Interestingly, while the strain is associated with plant hosts, it also demonstrates pathogenicity towards animals, indicating a complex life strategy that allows it to adapt to different environments and hosts. This dual ability highlights the ecological versatility of Pseudomonas chlororaphis strain B25. In summary, the presence of strain B25 in plant root nodules and its interactions with both plant and animal hosts underscore its potential role in ecological dynamics and its relevance in agricultural microbiology. Such traits may contribute to nutrient cycling and plant health, making it a subject of interest for further research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain B25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain B25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain B25 chromosome, complete genome.

Gene Summary

Adenine Count

1335624 bp

Thymine Count

1334168 bp

Guanine Count

2173770 bp

Cytosine Count

2173031 bp

Genome Length

7016593 bp

Protein-coding Genes

6219 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiopurine s-methyltransferaseC4K04_RS21995Not AvailableNegative4847581 - 484823724961.1
doda-type extradiol aromatic ring-opening family dioxygenaseC4K04_RS22000Not AvailablePositive4848339 - 484910627749.1
membrane protein insertase yidcC4K04_RS22005Not AvailableNegative4849220 - 485092760204.7
hypothetical proteinC4K04_RS32500Not AvailablePositive4851013 - 485134812299.6
crotonase/enoyl-coa hydratase family proteinC4K04_RS22015Not AvailablePositive4851314 - 485210528150.1
spermidine synthaseC4K04_RS22020Not AvailableNegative4852183 - 485293827931.5
class ii 3-deoxy-7-phosphoheptulonate synthaseC4K04_RS22025Not AvailablePositive4853101 - 485444749788.2
winged helix-turn-helix domain-containing proteinC4K04_RS22030Not AvailableNegative4854498 - 485570945621.6
duf1127 domain-containing proteinC4K04_RS22035Not AvailableNegative4855774 - 48559958712.57
lysr substrate-binding domain-containing proteinC4K04_RS22040Not AvailablePositive4856093 - 485694731753.5

Displaying genes 4391 – 4400 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.