Pseudomonas chlororaphis strain B25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain B25 is a Gram-negative, rod-shaped bacterium primarily found in the nodules of Chamaecytisus albus and the rhizosphere of various plants, including Brassica napus var. napus. This strain possesses a single replicon, indicating a streamlined genetic structure that is typical of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain B25 is significant, as it interacts with plant hosts in the Viridiplantae kingdom. This interaction suggests a potential for promoting plant health or influencing plant growth, which is a characteristic of many Pseudomonas species known for their beneficial effects in agricultural settings. Interestingly, while the strain is associated with plant hosts, it also demonstrates pathogenicity towards animals, indicating a complex life strategy that allows it to adapt to different environments and hosts. This dual ability highlights the ecological versatility of Pseudomonas chlororaphis strain B25. In summary, the presence of strain B25 in plant root nodules and its interactions with both plant and animal hosts underscore its potential role in ecological dynamics and its relevance in agricultural microbiology. Such traits may contribute to nutrient cycling and plant health, making it a subject of interest for further research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain B25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain B25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain B25 chromosome, complete genome.

Gene Summary

Adenine Count

1335624 bp

Thymine Count

1334168 bp

Guanine Count

2173770 bp

Cytosine Count

2173031 bp

Genome Length

7016593 bp

Protein-coding Genes

6219 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-glyNot AvailableNot AvailablePositive4130649 - 4130724Not Available
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseC4K04_RS18860Not AvailableNegative4130787 - 413134720658.9
excinuclease abc subunit uvrcC4K04_RS18865Not AvailableNegative4131796 - 413361967179.4
uvry/sira/gaca family response regulator transcription factorC4K04_RS18870Not AvailableNegative4133622 - 413426323395.8
helix-turn-helix domain-containing proteinC4K04_RS18875Not AvailableNegative4134409 - 413477413506.0
dna-binding proteinC4K04_RS18880Not AvailablePositive4134856 - 41350868199.85
gnat family n-acetyltransferaseC4K04_RS18885Not AvailableNegative4135143 - 413558916711.2
carbon-nitrogen hydrolase family proteinC4K04_RS18890Not AvailableNegative4135586 - 413634425784.1
hypothetical proteinC4K04_RS33260Not AvailablePositive4136503 - 41366374935.77
3-deoxy-7-phosphoheptulonate synthaseC4K04_RS18895Not AvailablePositive4136986 - 413806538720.4

Displaying genes 3761 – 3770 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.