Pseudomonas chlororaphis strain B25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain B25 is a Gram-negative, rod-shaped bacterium primarily found in the nodules of Chamaecytisus albus and the rhizosphere of various plants, including Brassica napus var. napus. This strain possesses a single replicon, indicating a streamlined genetic structure that is typical of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain B25 is significant, as it interacts with plant hosts in the Viridiplantae kingdom. This interaction suggests a potential for promoting plant health or influencing plant growth, which is a characteristic of many Pseudomonas species known for their beneficial effects in agricultural settings. Interestingly, while the strain is associated with plant hosts, it also demonstrates pathogenicity towards animals, indicating a complex life strategy that allows it to adapt to different environments and hosts. This dual ability highlights the ecological versatility of Pseudomonas chlororaphis strain B25. In summary, the presence of strain B25 in plant root nodules and its interactions with both plant and animal hosts underscore its potential role in ecological dynamics and its relevance in agricultural microbiology. Such traits may contribute to nutrient cycling and plant health, making it a subject of interest for further research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain B25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain B25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain B25 chromosome, complete genome.

Gene Summary

Adenine Count

1335624 bp

Thymine Count

1334168 bp

Guanine Count

2173770 bp

Cytosine Count

2173031 bp

Genome Length

7016593 bp

Protein-coding Genes

6219 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglutaminase-like domain-containing proteinC4K04_RS09850Not AvailablePositive2123389 - 212404824930.6
glutathione s-transferase family proteinC4K04_RS09855Not AvailablePositive2124091 - 212471423362.8
abc transporter atp-binding proteinC4K04_RS09860Not AvailablePositive2124847 - 212577934398.7
abc transporter permeaseC4K04_RS09865Not AvailablePositive2125776 - 212655528635.0
duf2062 domain-containing proteinC4K04_RS09870Not AvailableNegative2126604 - 212711919831.8
dna internalization-related competence protein comec/rec2C4K04_RS09875Not AvailablePositive2127268 - 212949981140.0
mota/tolq/exbb proton channel family proteinC4K04_RS09880Not AvailablePositive2129602 - 213023722933.6
exbd/tolr family proteinC4K04_RS09885Not AvailablePositive2130234 - 213066215321.4
tetraacyldisaccharide 4'-kinaseC4K04_RS09890Not AvailablePositive2130662 - 213167237156.0
trm112 family proteinC4K04_RS09895Not AvailablePositive2131696 - 21318816616.16

Displaying genes 2011 – 2020 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.