Pseudomonas chlororaphis strain B25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain B25 is a Gram-negative, rod-shaped bacterium primarily found in the nodules of Chamaecytisus albus and the rhizosphere of various plants, including Brassica napus var. napus. This strain possesses a single replicon, indicating a streamlined genetic structure that is typical of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain B25 is significant, as it interacts with plant hosts in the Viridiplantae kingdom. This interaction suggests a potential for promoting plant health or influencing plant growth, which is a characteristic of many Pseudomonas species known for their beneficial effects in agricultural settings. Interestingly, while the strain is associated with plant hosts, it also demonstrates pathogenicity towards animals, indicating a complex life strategy that allows it to adapt to different environments and hosts. This dual ability highlights the ecological versatility of Pseudomonas chlororaphis strain B25. In summary, the presence of strain B25 in plant root nodules and its interactions with both plant and animal hosts underscore its potential role in ecological dynamics and its relevance in agricultural microbiology. Such traits may contribute to nutrient cycling and plant health, making it a subject of interest for further research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain B25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain B25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain B25 chromosome, complete genome.

Gene Summary

Adenine Count

1335624 bp

Thymine Count

1334168 bp

Guanine Count

2173770 bp

Cytosine Count

2173031 bp

Genome Length

7016593 bp

Protein-coding Genes

6219 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kdsc family phosphataseC4K04_RS04760Not AvailableNegative1073904 - 107442818795.8
kpsf/gutq family sugar-phosphate isomeraseC4K04_RS04765Not AvailableNegative1074428 - 107540234511.1
atp-binding cassette domain-containing proteinC4K04_RS04770Not AvailablePositive1075678 - 107648729372.9
lipid asymmetry maintenance abc transporter permease subunit mlaeC4K04_RS04775Not AvailablePositive1076487 - 107728428469.3
outer membrane lipid asymmetry maintenance protein mladC4K04_RS04780Not AvailablePositive1077284 - 107775116461.0
phospholipid-binding protein mlacC4K04_RS04785Not AvailablePositive1077761 - 107841423969.5
lipid asymmetry maintenance protein mlabC4K04_RS04790Not AvailablePositive1078411 - 107871610385.6
bola family proteinC4K04_RS04795Not AvailablePositive1078832 - 10790839170.83
udp-n-acetylglucosamine 1-carboxyvinyltransferaseC4K04_RS04800Not AvailablePositive1079106 - 108037145038.1
atp phosphoribosyltransferaseC4K04_RS04805Not AvailablePositive1080499 - 108113422940.3

Displaying genes 1121 – 1130 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.