Pseudomonas sp. R5-89-07

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. R5-89-07 is characterized by having a single replicon, which indicates a straightforward genetic architecture that may contribute to its adaptability and stability in various environments. The complete genomic sequence of this strain is cataloged under the accession number NZ_CP027727.1, providing a valuable resource for researchers interested in the genetic makeup and potential applications of this microorganism. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and as plant and animal pathogens. The traits of Pseudomonas sp. R5-89-07 may reflect similar ecological roles, potentially allowing it to interact with various biological systems, including bioremediation processes or plant growth promotion. Understanding the specific traits of Pseudomonas sp. R5-89-07, particularly its genomic features and single replicon structure, can provide insights into its ecological functions and evolutionary adaptations. The genomic data may also facilitate further studies into its capabilities, such as its role in nutrient cycling or biocontrol in agricultural settings. Overall, this strain represents a valuable subject for microbiological research, with implications for environmental and agricultural applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. R5-89-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. R5-89-07
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. R5-89-07 chromosome, complete genome.

Gene Summary

Adenine Count

1172264 bp

Thymine Count

1189101 bp

Guanine Count

1818971 bp

Cytosine Count

1816809 bp

Genome Length

5997145 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath small subunitC4J94_RS26830Not AvailablePositive5835476 - 583598218403.2
type vi secretion system contractile sheath large subunitC4J94_RS26835Not AvailablePositive5835985 - 583748155697.5
hcp family type vi secretion system effectorC4J94_RS26840Not AvailablePositive5837644 - 583813217517.9
type vi secretion system baseplate subunit tsseC4J94_RS26845Not AvailablePositive5838211 - 583872618866.6
type vi secretion system baseplate subunit tssfC4J94_RS26850Not AvailablePositive5838723 - 584058269347.8
type vi secretion system baseplate subunit tssgC4J94_RS26855Not AvailablePositive5840546 - 584158939181.1
type vi secretion system atpase tsshC4J94_RS26860Not AvailablePositive5841582 - 584423696936.5
type vi secretion system vgr family proteinC4J94_RS26865Not AvailablePositive5844393 - 584633372267.6
dcrb-related proteinC4J94_RS26870Not AvailablePositive5846348 - 584678216170.3
rhs repeat-associated core domain-containing proteinC4J94_RS26875Not AvailablePositive5846795 - 5851183162434.0

Displaying genes 5351 – 5360 of 5492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.