Pseudomonas sp. R5-89-07

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. R5-89-07 is characterized by having a single replicon, which indicates a straightforward genetic architecture that may contribute to its adaptability and stability in various environments. The complete genomic sequence of this strain is cataloged under the accession number NZ_CP027727.1, providing a valuable resource for researchers interested in the genetic makeup and potential applications of this microorganism. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and as plant and animal pathogens. The traits of Pseudomonas sp. R5-89-07 may reflect similar ecological roles, potentially allowing it to interact with various biological systems, including bioremediation processes or plant growth promotion. Understanding the specific traits of Pseudomonas sp. R5-89-07, particularly its genomic features and single replicon structure, can provide insights into its ecological functions and evolutionary adaptations. The genomic data may also facilitate further studies into its capabilities, such as its role in nutrient cycling or biocontrol in agricultural settings. Overall, this strain represents a valuable subject for microbiological research, with implications for environmental and agricultural applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. R5-89-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. R5-89-07
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. R5-89-07 chromosome, complete genome.

Gene Summary

Adenine Count

1172264 bp

Thymine Count

1189101 bp

Guanine Count

1818971 bp

Cytosine Count

1816809 bp

Genome Length

5997145 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rida family proteinC4J94_RS15635Not AvailablePositive3412368 - 341277815227.3
duf1028 domain-containing proteinC4J94_RS15640Not AvailablePositive3412790 - 341346723539.8
acetylornithine deacetylaseC4J94_RS15645Not AvailablePositive3413464 - 341460941015.5
lysr substrate-binding domain-containing proteinC4J94_RS15650Not AvailableNegative3414729 - 341564033579.8
purine-cytosine permease family proteinC4J94_RS15655Not AvailablePositive3415892 - 341730750061.2
tpm domain-containing proteinC4J94_RS15660Not AvailableNegative3417547 - 341874641810.2
alpha/beta fold hydrolaseC4J94_RS15665Not AvailablePositive3418878 - 341969329294.8
pas domain-containing sensor histidine kinaseC4J94_RS15670Not AvailablePositive3419683 - 342084342147.5
sdr family nad(p)-dependent oxidoreductaseC4J94_RS15675Not AvailableNegative3420815 - 342119513277.0
aaa family atpaseC4J94_RS15680Not AvailablePositive3421351 - 342186018143.7

Displaying genes 3121 – 3130 of 5492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.