Pseudomonas sp. R5-89-07

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. R5-89-07 is characterized by having a single replicon, which indicates a straightforward genetic architecture that may contribute to its adaptability and stability in various environments. The complete genomic sequence of this strain is cataloged under the accession number NZ_CP027727.1, providing a valuable resource for researchers interested in the genetic makeup and potential applications of this microorganism. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and as plant and animal pathogens. The traits of Pseudomonas sp. R5-89-07 may reflect similar ecological roles, potentially allowing it to interact with various biological systems, including bioremediation processes or plant growth promotion. Understanding the specific traits of Pseudomonas sp. R5-89-07, particularly its genomic features and single replicon structure, can provide insights into its ecological functions and evolutionary adaptations. The genomic data may also facilitate further studies into its capabilities, such as its role in nutrient cycling or biocontrol in agricultural settings. Overall, this strain represents a valuable subject for microbiological research, with implications for environmental and agricultural applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. R5-89-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. R5-89-07
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. R5-89-07 chromosome, complete genome.

Gene Summary

Adenine Count

1172264 bp

Thymine Count

1189101 bp

Guanine Count

1818971 bp

Cytosine Count

1816809 bp

Genome Length

5997145 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitC4J94_RS00740Not AvailablePositive176235 - 17712532832.3
efflux transporter outer membrane subunitC4J94_RS00745Not AvailablePositive177122 - 17856451104.5
nadh:ubiquinone oxidoreductase subunit nC4J94_RS00750Not AvailablePositive178647 - 17927924307.3
ydga family proteinC4J94_RS00755Not AvailablePositive179532 - 18102852818.1
poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaaC4J94_RS00760Not AvailablePositive181274 - 18375491802.4
poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgabC4J94_RS00765Not AvailablePositive183767 - 18576473846.7
poly-beta-1,6-n-acetyl-d-glucosamine synthaseC4J94_RS00770Not AvailablePositive185767 - 18710750853.5
poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgadC4J94_RS00775Not AvailablePositive187110 - 18759217814.8
shlb/fhac/hecb family hemolysin secretion/activation proteinC4J94_RS00780Not AvailablePositive188060 - 18978164153.7
duf637 domain-containing proteinC4J94_RS00785Not AvailablePositive189813 - 198116285295.0

Displaying genes 261 – 270 of 5492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.