Pseudomonas sp. R5-89-07

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. R5-89-07 is characterized by having a single replicon, which indicates a straightforward genetic architecture that may contribute to its adaptability and stability in various environments. The complete genomic sequence of this strain is cataloged under the accession number NZ_CP027727.1, providing a valuable resource for researchers interested in the genetic makeup and potential applications of this microorganism. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and as plant and animal pathogens. The traits of Pseudomonas sp. R5-89-07 may reflect similar ecological roles, potentially allowing it to interact with various biological systems, including bioremediation processes or plant growth promotion. Understanding the specific traits of Pseudomonas sp. R5-89-07, particularly its genomic features and single replicon structure, can provide insights into its ecological functions and evolutionary adaptations. The genomic data may also facilitate further studies into its capabilities, such as its role in nutrient cycling or biocontrol in agricultural settings. Overall, this strain represents a valuable subject for microbiological research, with implications for environmental and agricultural applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. R5-89-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. R5-89-07
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. R5-89-07 chromosome, complete genome.

Gene Summary

Adenine Count

1172264 bp

Thymine Count

1189101 bp

Guanine Count

1818971 bp

Cytosine Count

1816809 bp

Genome Length

5997145 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(13) synthase trudC4J94_RS06800Not AvailablePositive1492727 - 149378538583.0
5'/3'-nucleotidase sureC4J94_RS06805Not AvailablePositive1493773 - 149452226195.1
protein-l-isoaspartate(d-aspartate) o-methyltransferaseC4J94_RS06810Not AvailablePositive1494564 - 149519923482.6
peptidoglycan dd-metalloendopeptidase family proteinC4J94_RS06815Not AvailablePositive1495407 - 149624329111.8
rna polymerase sigma factor rposC4J94_RS06820Not AvailablePositive1496349 - 149735638180.6
cold-shock proteinC4J94_RS06825Not AvailableNegative1497576 - 14977857727.11
dctp deaminaseC4J94_RS06830Not AvailablePositive1498173 - 149873921231.3
hypothetical proteinC4J94_RS06835Not AvailablePositive1498848 - 14990456886.14
ligase-associated dna damage response endonuclease pdemC4J94_RS06840Not AvailableNegative1499065 - 149971523844.7
ligase-associated dna damage response dexh box helicaseC4J94_RS06845Not AvailableNegative1499715 - 150219591353.6

Displaying genes 1431 – 1440 of 5492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.