Pseudomonas chlororaphis subsp. chlororaphis strain DSM 50083

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. chlororaphis strain DSM 50083 is a Gram-negative bacterium characterized by its rod shape. This strain possesses a single replicon, indicating a streamlined genetic structure typical of many bacteria within the Pseudomonas genus. The strain is cataloged under the accession number NZ_CP027712.1, which provides a reference for its genomic information. Pseudomonas chlororaphis subsp. chlororaphis is known for its ecological role in various environments, particularly in soil, where it can contribute to nutrient cycling and plant interactions. This strain's Gram-negative nature suggests that it possesses a complex cell wall structure, which may confer advantages in adapting to diverse environmental conditions and resisting certain antimicrobial agents. The presence of a single replicon may also indicate a stable genomic organization, which can be beneficial for the bacterium's survival and persistence in its habitat. Understanding the traits of DSM 50083 can provide insights into its potential applications in agriculture, such as its use as a biocontrol agent against plant pathogens or in promoting plant growth through beneficial interactions. Overall, Pseudomonas chlororaphis subsp. chlororaphis strain DSM 50083 exemplifies the diverse functionalities of Pseudomonas species in ecological systems, particularly in their roles as beneficial microorganisms in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. chlororaphis strain DSM 50083

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. chlororaphis strain DSM 50083
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. chlororaphis strain DSM 50083

Gene Summary

Adenine Count

1261669 bp

Thymine Count

1258398 bp

Guanine Count

2142216 bp

Cytosine Count

2145904 bp

Genome Length

6808187 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glxa family transcriptional regulatorC4K27_RS21185Not AvailableNegative4731489 - 473248135355.4
isonitrile hydrataseC4K27_RS21190Not AvailablePositive4732596 - 473328224175.1
2-hexyl-5-propylresorcinol biosynthesis acyl carrier protein darcC4K27_RS21195Not AvailableNegative4733372 - 47336238972.45
beta-ketoacyl synthase darbC4K27_RS21200Not AvailableNegative4733710 - 473486142371.0
2-hexyl, 5-propylresorcinol biosynthesis aromatase daraC4K27_RS21205Not AvailableNegative4734869 - 473581035121.2
gfa family proteinC4K27_RS21210Not AvailablePositive4736319 - 473672314996.6
aminoglycoside phosphotransferase family proteinC4K27_RS21215Not AvailableNegative4736946 - 473775229990.2
arsr/smtb family transcription factorC4K27_RS21220Not AvailableNegative4737768 - 473812712737.4
srpbcc family proteinC4K27_RS21225Not AvailableNegative4738117 - 473857217221.4
hypothetical proteinC4K27_RS21230Not AvailablePositive4738782 - 473942923877.4

Displaying genes 4241 – 4250 of 6222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.