Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Weissella |
| Species | Weissella confusa |
| Strain | strain VTT E-90392 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry naturally fermented Greek sausage; fermented butter; Indonesian home-made soya product; sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Cenchrus americanus |
| Cell arrangement | Chains; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Weissella confusa strain VTT E-90392 chromosome, complete genome.
Gene Summary
Adenine Count
647280 bp
Thymine Count
650440 bp
Guanine Count
529480 bp
Cytosine Count
528605 bp
Genome Length
2355805 bp
Protein-coding Genes
2076 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | C6P08_RS02975 | Not Available | Positive | 588649 - 588879 | 8415.04 |
| helix-turn-helix domain-containing protein | C6P08_RS02980 | Not Available | Positive | 588979 - 589659 | 25951.7 |
| is3 family transposase | C6P08_RS02985 | Not Available | Positive | 589698 - 590582 | 34305.2 |
| vtt domain-containing protein | C6P08_RS02990 | Not Available | Negative | 590698 - 591363 | 24538.8 |
| peptidylprolyl isomerase | C6P08_RS02995 | Not Available | Positive | 591511 - 592092 | 20909.0 |
| cvfd/ygs/gsp13 family rna-binding post-transcriptional regulator | C6P08_RS03000 | Not Available | Positive | 592155 - 592556 | 15364.0 |
| hypothetical protein | C6P08_RS03005 | Not Available | Positive | 592575 - 592961 | 14209.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 593377 - 594953 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 595204 - 598118 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 598222 - 598338 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

