Weissella confusa strain VTT E-90392

Gram-negativeRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella confusa strain VTT E-90392 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. This strain is typically found in various fermented products, including dry naturally fermented Greek sausage, fermented butter, and Indonesian home-made soya products, as well as in sugar cane. Its cellular arrangement is characterized by chains and singles. This strain is notable for its ability to inhabit multiple hosts, including Homo sapiens, Metazoa, Cenchrus americanus, and Canis lupus familiaris, indicating a versatile ecological role. While it is classified as pathogenic in humans, the specific implications of this pathogenicity remain context-dependent and are not detailed here. The genomic structure of Weissella confusa strain VTT E-90392 is represented by two replicons, as indicated by its accession numbers NZ_CP027565.1 and NZ_CP027566.1. These genetic characteristics may contribute to its adaptability in various environments, particularly in fermented foods where it plays a role in the fermentation process. Understanding the ecological niche and potential health implications of Weissella confusa strain VTT E-90392 is critical, especially given its presence in food products consumed by humans. Its association with both beneficial fermentation processes and pathogenicity underscores the importance of further research into its roles in food microbiology and human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella confusa
Strainstrain VTT E-90392

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdry naturally fermented Greek sausage; fermented butter; Indonesian home-made soya product; sugar cane
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Cenchrus americanus
Cell arrangementChains; Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella confusa strain VTT E-90392 chromosome, complete genome.

Gene Summary

Adenine Count

647280 bp

Thymine Count

650440 bp

Guanine Count

529480 bp

Cytosine Count

528605 bp

Genome Length

2355805 bp

Protein-coding Genes

2076 genes

Non-Coding Genes

213 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yihy/virulence factor brkb family proteinC6P08_RS11040Not AvailablePositive2312808 - 231369832485.9
threonine/serine exporter family proteinC6P08_RS11045Not AvailablePositive2314046 - 231481026874.7
threonine/serine exporter family proteinC6P08_RS11050Not AvailablePositive2314823 - 231525715598.6
undecaprenyl-diphosphate phosphataseC6P08_RS11055Not AvailableNegative2315303 - 231615430986.9
duf4097 family beta strand repeat-containing proteinC6P08_RS11060Not AvailableNegative2316242 - 231712332057.3
duf1700 domain-containing proteinC6P08_RS11065Not AvailableNegative2317116 - 231775423643.2
padr family transcriptional regulatorC6P08_RS11070Not AvailableNegative2317744 - 231807012542.8
pspc domain-containing proteinC6P08_RS11075Not AvailablePositive2318195 - 23184559889.89
nupc/nupg family nucleoside cnt transporterC6P08_RS11080Not AvailableNegative2318513 - 231975445071.2
lcp family proteinC6P08_RS11085Not AvailableNegative2319928 - 232121446269.2

Displaying genes 2251 – 2260 of 2301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.