Weissella confusa strain VTT E-90392

Gram-negativeRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella confusa strain VTT E-90392 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. This strain is typically found in various fermented products, including dry naturally fermented Greek sausage, fermented butter, and Indonesian home-made soya products, as well as in sugar cane. Its cellular arrangement is characterized by chains and singles. This strain is notable for its ability to inhabit multiple hosts, including Homo sapiens, Metazoa, Cenchrus americanus, and Canis lupus familiaris, indicating a versatile ecological role. While it is classified as pathogenic in humans, the specific implications of this pathogenicity remain context-dependent and are not detailed here. The genomic structure of Weissella confusa strain VTT E-90392 is represented by two replicons, as indicated by its accession numbers NZ_CP027565.1 and NZ_CP027566.1. These genetic characteristics may contribute to its adaptability in various environments, particularly in fermented foods where it plays a role in the fermentation process. Understanding the ecological niche and potential health implications of Weissella confusa strain VTT E-90392 is critical, especially given its presence in food products consumed by humans. Its association with both beneficial fermentation processes and pathogenicity underscores the importance of further research into its roles in food microbiology and human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella confusa
Strainstrain VTT E-90392

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdry naturally fermented Greek sausage; fermented butter; Indonesian home-made soya product; sugar cane
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Cenchrus americanus
Cell arrangementChains; Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella confusa strain VTT E-90392 chromosome, complete genome.

Gene Summary

Adenine Count

647280 bp

Thymine Count

650440 bp

Guanine Count

529480 bp

Cytosine Count

528605 bp

Genome Length

2355805 bp

Protein-coding Genes

2076 genes

Non-Coding Genes

213 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate diphosphokinaseC6P08_RS07765Not AvailableNegative1552925 - 155389635420.4
dihydroorotate oxidaseC6P08_RS07770Not AvailablePositive1554116 - 155505133458.0
ecf transporter s componentC6P08_RS07775Not AvailablePositive1555273 - 155583620311.5
atp-binding cassette domain-containing proteinC6P08_RS07780Not AvailablePositive1555839 - 155725151435.9
energy-coupling factor transporter transmembrane component t family proteinC6P08_RS07785Not AvailablePositive1557244 - 155791224744.9
xylose isomeraseC6P08_RS07790Not AvailableNegative1558008 - 155939352355.5
type i 3-dehydroquinate dehydrataseC6P08_RS07795Not AvailableNegative1559650 - 156036325701.4
shikimate kinaseC6P08_RS07800Not AvailableNegative1560365 - 156086818010.8
3-phosphoshikimate 1-carboxyvinyltransferaseC6P08_RS07805Not AvailableNegative1560868 - 156216345835.1
chorismate synthaseC6P08_RS07810Not AvailableNegative1562185 - 156336342871.9

Displaying genes 1591 – 1600 of 2301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.