Weissella confusa strain VTT E-90392

Gram-negativeRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella confusa strain VTT E-90392 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. This strain is typically found in various fermented products, including dry naturally fermented Greek sausage, fermented butter, and Indonesian home-made soya products, as well as in sugar cane. Its cellular arrangement is characterized by chains and singles. This strain is notable for its ability to inhabit multiple hosts, including Homo sapiens, Metazoa, Cenchrus americanus, and Canis lupus familiaris, indicating a versatile ecological role. While it is classified as pathogenic in humans, the specific implications of this pathogenicity remain context-dependent and are not detailed here. The genomic structure of Weissella confusa strain VTT E-90392 is represented by two replicons, as indicated by its accession numbers NZ_CP027565.1 and NZ_CP027566.1. These genetic characteristics may contribute to its adaptability in various environments, particularly in fermented foods where it plays a role in the fermentation process. Understanding the ecological niche and potential health implications of Weissella confusa strain VTT E-90392 is critical, especially given its presence in food products consumed by humans. Its association with both beneficial fermentation processes and pathogenicity underscores the importance of further research into its roles in food microbiology and human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella confusa
Strainstrain VTT E-90392

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdry naturally fermented Greek sausage; fermented butter; Indonesian home-made soya product; sugar cane
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Cenchrus americanus
Cell arrangementChains; Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella confusa strain VTT E-90392 chromosome, complete genome.

Gene Summary

Adenine Count

647280 bp

Thymine Count

650440 bp

Guanine Count

529480 bp

Cytosine Count

528605 bp

Genome Length

2355805 bp

Protein-coding Genes

2076 genes

Non-Coding Genes

213 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
csbd family proteinC6P08_RS05455Not AvailablePositive1068102 - 10683087275.53
5' nucleotidase, nt5c typeC6P08_RS05460Not AvailablePositive1068471 - 106906422401.3
deor/glpr family dna-binding transcription regulatorC6P08_RS05465Not AvailablePositive1069221 - 106998827415.2
1-phosphofructokinaseC6P08_RS05470Not AvailablePositive1069985 - 107089631880.0
fructose-specific pts transporter subunit eiicC6P08_RS05475Not AvailablePositive1070917 - 107285466598.5
is3 family transposaseC6P08_RS05480Not AvailableNegative1072942 - 107382634305.2
helix-turn-helix domain-containing proteinC6P08_RS05485Not AvailableNegative1073865 - 107454525951.7
ofa family mfs transporterC6P08_RS05490Not AvailablePositive1075277 - 107655445699.8
gfo/idh/moca family proteinC6P08_RS05495Not AvailablePositive1076696 - 107765835338.0
multidrug resistance efflux transporter family proteinC6P08_RS05500Not AvailableNegative1077711 - 107867635781.7

Displaying genes 1151 – 1160 of 2301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.