Stutzerimonas stutzeri strain DW2-1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Stutzerimonas

Description

Stutzerimonas stutzeri strain DW2-1 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, utilizing organic compounds as its energy source, and thrives in aerobic environments, necessitating the presence of oxygen for its metabolic processes. Furthermore, Stutzerimonas stutzeri strain DW2-1 is described as host-associated, indicating a potential relationship with a specific host organism, which may play a significant role in its ecological niche. The combination of its Gram-negative cell wall structure and aerobic metabolism suggests that Stutzerimonas stutzeri strain DW2-1 may possess unique adaptations for survival and growth in oxygen-rich environments, potentially including the production of specific enzymes or metabolic pathways that enhance its ability to exploit organic substrates found within its host. This strain may contribute to the overall microbial community dynamics within its host, influencing nutrient cycling or other biological processes. Understanding the traits of Stutzerimonas stutzeri strain DW2-1 can provide insights into its functional roles in the microbiome of its host, which may be crucial for maintaining host health or influencing host physiological processes. Further research into this strain could elucidate its specific contributions to the host-associated microbiota and its interactions with other microbial species in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusStutzerimonas
SpeciesStutzerimonas stutzeri
Strainstrain DW2-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Stutzerimonas stutzeri strain DW2-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Stutzerimonas stutzeri strain DW2-1


Gene Summary

Adenine Count

811427 bp

Thymine Count

817569 bp

Guanine Count

1388216 bp

Cytosine Count

1383448 bp

Genome Length

4400660 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Replication initiation proteinC6Y58_RS00010Not Available+755 - 201747539.0
hypothetical proteinC6Y58_RS20825Not Available+2014 - 21636195.39
dna-binding proteinC6Y58_RS00015Not Available+2261 - 260512242.8
Major coat proteinC6Y58_RS00020Not Available+2815 - 30307347.15
virulence factor tspb c-terminal domain-related proteinC6Y58_RS20715Not Available+3125 - 452247995.9
Putative minor coat proteinC6Y58_RS00030Not Available+4522 - 482710279.0
Orf7C6Y58_RS00035Not Available+4831 - 599443012.0
hypothetical proteinC6Y58_RS20720Not Available-6213 - 655712648.7
hypothetical proteinC6Y58_RS00045Not Available-7056 - 72687838.64
Replication initiation proteinC6Y58_RS00050Not Available+7396 - 865847539.0

Displaying genes 1 – 10 of 4135 in total

Metabolites

1716 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1716 metabolites