Stutzerimonas stutzeri strain DW2-1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Stutzerimonas

Description

Stutzerimonas stutzeri strain DW2-1 is a Gram-negative, rod-shaped bacterium characterized as a heterotrophic aerobe. This strain is notable for its single-cell arrangement and lack of mobility, despite the presence of flagella. It thrives in a mesophilic temperature range, making it well-suited for various biological environments. This bacterium is associated with multiple hosts, including members of the Viridiplantae, specifically citrus plants, as well as serpents and the pest Diaphorina citri. It possesses a single circular replicon and features a double membrane structure, typical of Gram-negative organisms. The ecological role of Stutzerimonas stutzeri strain DW2-1 is significant, as it exists as a free-living organism within its habitats. Its association with various hosts indicates potential interactions that may influence plant health and pest dynamics, particularly in citrus ecosystems. Understanding the traits of this strain can provide insights into its ecological functions and the potential impact on agricultural systems, especially considering its association with a pest like Diaphorina citri, which is known to affect citrus crops. The data suggest that Stutzerimonas stutzeri strain DW2-1 may play a role in the microbiome of these organisms, contributing to the overall health and stability of the ecosystems it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusStutzerimonas
SpeciesStutzerimonas stutzeri
Strainstrain DW2-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Stutzerimonas stutzeri strain DW2-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae, Citrus, Serpentes
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Stutzerimonas stutzeri strain DW2-1 chromosome, complete genome.

Gene Summary

Adenine Count

811427 bp

Thymine Count

817569 bp

Guanine Count

1388216 bp

Cytosine Count

1383448 bp

Genome Length

4400660 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit iC6Y58_RS10550Not AvailableNegative2181543 - 218318060386.9
cytochrome c oxidase subunit iiC6Y58_RS10555Not AvailableNegative2183193 - 218432642054.3
hypothetical proteinC6Y58_RS10560Not AvailableNegative2184559 - 21848229891.3
pa0069 family radical sam proteinC6Y58_RS10565Not AvailableNegative2185137 - 218620139851.9
acyltransferase family proteinC6Y58_RS10575Not AvailablePositive2186501 - 218757139696.4
duf1835 domain-containing proteinC6Y58_RS10580Not AvailableNegative2187707 - 218847427978.1
yhev family putative zinc ribbon proteinC6Y58_RS10585Not AvailableNegative2188478 - 218875610053.0
oligopeptidase aC6Y58_RS10590Not AvailableNegative2188753 - 219080476602.3
gamma carbonic anhydrase family proteinC6Y58_RS10595Not AvailablePositive2191030 - 219156619046.9
voc family proteinC6Y58_RS10600Not AvailableNegative2191573 - 219199815842.8

Displaying genes 2131 – 2140 of 4135 in total

Metabolites

1716 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1716 metabolites

Health Effects

No health effects information available for this bacterium.