Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | At1D1609_RS17240 | Not Available | Negative | 361970 - 363034 | 39217.8 |
| transporter substrate-binding domain-containing protein | At1D1609_RS17245 | Not Available | Positive | 363371 - 364210 | 30042.2 |
| amino acid abc transporter permease | At1D1609_RS17250 | Not Available | Positive | 364404 - 365147 | 27019.6 |
| amino acid abc transporter permease | At1D1609_RS17255 | Not Available | Positive | 365144 - 365926 | 28654.9 |
| amino acid abc transporter atp-binding protein | At1D1609_RS17260 | Not Available | Positive | 365939 - 366739 | 28693.9 |
| mmge/prpd family protein | At1D1609_RS17265 | Not Available | Positive | 366744 - 368090 | 46704.6 |
| llm class flavin-dependent oxidoreductase | At1D1609_RS17270 | Not Available | Positive | 368109 - 369425 | 48601.8 |
| methyl-accepting chemotaxis protein | At1D1609_RS17275 | Not Available | Negative | 369508 - 371244 | 63645.0 |
| nad(p)/fad-dependent oxidoreductase | At1D1609_RS17280 | Not Available | Positive | 371564 - 372817 | 45294.6 |
| type iv secretory system conjugative dna transfer family protein | At1D1609_RS17285 | Not Available | Negative | 372834 - 373367 | 19326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


