Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | At1D1609_RS16990 | Not Available | Negative | 304948 - 307461 | 89259.0 |
| udp-forming cellulose synthase catalytic subunit | At1D1609_RS16995 | Not Available | Negative | 307458 - 309647 | 81742.4 |
| cellulose biosynthesis protein bcsn | At1D1609_RS17000 | Not Available | Negative | 309742 - 310644 | 31560.3 |
| age family epimerase/isomerase | At1D1609_RS17005 | Not Available | Positive | 311077 - 312261 | 44328.2 |
| glycoside hydrolase family 26 protein | At1D1609_RS17010 | Not Available | Negative | 312313 - 313275 | 36319.3 |
| duf995 domain-containing protein | At1D1609_RS17015 | Not Available | Negative | 313289 - 313792 | 18461.2 |
| glycosyltransferase family 2 protein | At1D1609_RS17020 | Not Available | Negative | 313807 - 315744 | 71314.9 |
| udp-glucose 4-epimerase gale | At1D1609_RS17025 | Not Available | Negative | 315741 - 316724 | 35178.8 |
| udp-glucuronic acid decarboxylase family protein | At1D1609_RS17030 | Not Available | Negative | 316726 - 317748 | 37731.9 |
| hypothetical protein | At1D1609_RS17035 | Not Available | Positive | 318132 - 318482 | 11959.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


