Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | At1D1609_RS16835 | Not Available | Negative | 270408 - 270932 | 18649.8 |
| aldo/keto reductase | At1D1609_RS16840 | Not Available | Negative | 270932 - 271825 | 31840.3 |
| llm class flavin-dependent oxidoreductase | At1D1609_RS16845 | Not Available | Negative | 271825 - 272982 | 42514.2 |
| gntr family transcriptional regulator | At1D1609_RS16850 | Not Available | Positive | 273083 - 273787 | 26057.4 |
| abc transporter atp-binding protein | At1D1609_RS16855 | Not Available | Positive | 274123 - 275199 | 39074.3 |
| abc transporter substrate-binding protein | At1D1609_RS16860 | Not Available | Positive | 275252 - 276502 | 45775.7 |
| carbohydrate abc transporter permease | At1D1609_RS16865 | Not Available | Positive | 276676 - 277587 | 33882.2 |
| carbohydrate abc transporter permease | At1D1609_RS16870 | Not Available | Positive | 277592 - 278446 | 30789.7 |
| alpha-glucosidase | At1D1609_RS16875 | Not Available | Positive | 278458 - 280452 | 74250.5 |
| pilus assembly protein tadg-related protein | At1D1609_RS16880 | Not Available | Negative | 280478 - 281767 | 45759.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


