Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | At1D1609_RS15700 | Not Available | Positive | 11143 - 12189 | 37820.6 |
| response regulator | At1D1609_RS15705 | Not Available | Positive | 12284 - 13024 | 27989.0 |
| atp-binding protein | At1D1609_RS15710 | Not Available | Positive | 13021 - 14337 | 47558.3 |
| organic hydroperoxide resistance protein | At1D1609_RS15715 | Not Available | Positive | 14484 - 14900 | 14342.1 |
| aldehyde dehydrogenase family protein | At1D1609_RS15720 | Not Available | Positive | 15210 - 16628 | 50778.1 |
| hypothetical protein | At1D1609_RS29745 | Not Available | Negative | 16958 - 17128 | 6303.31 |
| alpha/beta fold hydrolase | At1D1609_RS15725 | Not Available | Negative | 17197 - 18177 | 35524.2 |
| dps family protein | At1D1609_RS15730 | Not Available | Negative | 18197 - 18715 | 19624.2 |
| fdhf/ydep family oxidoreductase | At1D1609_RS15735 | Not Available | Positive | 19128 - 21422 | 83313.7 |
| atp-binding protein | At1D1609_RS15740 | Not Available | Positive | 21673 - 23253 | 57102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


