Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1609_RS15645 | Not Available | Negative | 2212 - 2475 | 10169.3 |
| acyltransferase family protein | At1D1609_RS15650 | Not Available | Positive | 2530 - 3591 | 39699.7 |
| sgnh/gdsl hydrolase family protein | At1D1609_RS15655 | Not Available | Negative | 3588 - 4304 | 26113.4 |
| acyltransferase family protein | At1D1609_RS15660 | Not Available | Positive | 4355 - 5422 | 39758.0 |
| type iv secretory system conjugative dna transfer family protein | At1D1609_RS15665 | Not Available | Negative | 5450 - 5740 | 10768.7 |
| type iv secretory system conjugative dna transfer family protein | At1D1609_RS15670 | Not Available | Positive | 5805 - 5939 | 5464.71 |
| hypothetical protein | At1D1609_RS15675 | Not Available | Negative | 6142 - 7230 | 36812.7 |
| cytochrome p460 family protein | At1D1609_RS15685 | Not Available | Positive | 7701 - 8210 | 18120.3 |
| cytochrome c biogenesis protein dipz | At1D1609_RS15690 | Not Available | Positive | 8392 - 10137 | 61215.4 |
| alpha/beta fold hydrolase | At1D1609_RS15695 | Not Available | Positive | 10183 - 10941 | 26651.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


