Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1609_RS20495 | Not Available | Positive | 1053115 - 1053432 | 11188.9 |
| hypothetical protein | At1D1609_RS20500 | Not Available | Positive | 1053451 - 1053714 | 9747.66 |
| hypothetical protein | At1D1609_RS20505 | Not Available | Positive | 1053698 - 1054036 | 12078.2 |
| Head completion protein | At1D1609_RS20510 | Not Available | Positive | 1054036 - 1055463 | 51754.9 |
| hypothetical protein | At1D1609_RS29495 | Not Available | Positive | 1055463 - 1055621 | 5817.07 |
| Dna injection protein | At1D1609_RS20515 | Not Available | Positive | 1055621 - 1056298 | 22372.1 |
| hypothetical protein | At1D1609_RS20520 | Not Available | Positive | 1056298 - 1058199 | 65577.9 |
| Hypothetical protein | At1D1609_RS20525 | Not Available | Positive | 1058196 - 1060313 | 73016.4 |
| hypothetical protein | At1D1609_RS29905 | Not Available | Positive | 1060568 - 1060705 | 5207.55 |
| hypothetical protein | At1D1609_RS20535 | Not Available | Negative | 1060683 - 1060997 | 11580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


