Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Duf3307-containing protein | At1D1609_RS20445 | Not Available | Positive | 1044893 - 1045228 | 12368.4 |
| hypothetical protein | At1D1609_RS20450 | Not Available | Positive | 1045259 - 1045519 | 9665.77 |
| Hypothetical protein | At1D1609_RS29800 | Not Available | Positive | 1045778 - 1046170 | 14320.0 |
| hypothetical protein | At1D1609_RS20460 | Not Available | Positive | 1046183 - 1046506 | 11106.2 |
| Putative terminase small subunit | At1D1609_RS20465 | Not Available | Positive | 1046669 - 1047139 | 17517.7 |
| Putative terminase large subunit | At1D1609_RS20470 | Not Available | Positive | 1047120 - 1048616 | 55775.8 |
| Putative portal protein | At1D1609_RS20475 | Not Available | Positive | 1048616 - 1050577 | 73129.2 |
| hypothetical protein | At1D1609_RS20480 | Not Available | Positive | 1050665 - 1051510 | 30492.3 |
| Hypothetical protein | At1D1609_RS20485 | Not Available | Positive | 1051537 - 1052658 | 40979.3 |
| hypothetical protein | At1D1609_RS20490 | Not Available | Positive | 1052678 - 1053118 | 15434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


