Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase-related protein | At1D1609_RS28075 | Not Available | Positive | 157831 - 162930 | 189268.0 |
| parb n-terminal domain-containing protein | At1D1609_RS28080 | Not Available | Positive | 163441 - 165264 | 65614.3 |
| hypothetical protein | At1D1609_RS28085 | Not Available | Positive | 165354 - 165830 | 17502.7 |
| duf7007 domain-containing protein | At1D1609_RS28090 | Not Available | Positive | 165827 - 166717 | 32831.4 |
| hypothetical protein | At1D1609_RS28095 | Not Available | Positive | 166714 - 167043 | 12668.2 |
| hypothetical protein | At1D1609_RS28100 | Not Available | Positive | 167432 - 168016 | 20588.3 |
| ardc family protein | At1D1609_RS28105 | Not Available | Positive | 168317 - 169243 | 34398.6 |
| hypothetical protein | At1D1609_RS29850 | Not Available | Negative | 169250 - 169426 | 6587.87 |
| duf736 domain-containing protein | At1D1609_RS28115 | Not Available | Positive | 169884 - 170195 | 11478.3 |
| hypothetical protein | At1D1609_RS29855 | Not Available | Positive | 170493 - 170654 | 6083.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


