Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | At1D1609_RS27925 | Not Available | Negative | 129013 - 129996 | 35434.0 |
| alpha/beta hydrolase family protein | At1D1609_RS27930 | Not Available | Negative | 130092 - 131225 | 40981.8 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | At1D1609_RS27935 | Not Available | Negative | 131222 - 132931 | 63133.9 |
| mfs transporter | At1D1609_RS27940 | Not Available | Negative | 133060 - 134262 | 41661.0 |
| lysr family transcriptional regulator | At1D1609_RS27945 | Not Available | Positive | 134864 - 135811 | 35235.0 |
| alpha/beta hydrolase | At1D1609_RS27950 | Not Available | Positive | 136259 - 137161 | 33235.6 |
| tetr/acrr family transcriptional regulator | At1D1609_RS27955 | Not Available | Negative | 137316 - 137975 | 23938.0 |
| tn3 family transposase | At1D1609_RS27965 | Not Available | Negative | 138564 - 139130 | 20477.9 |
| amino acid abc transporter permease | At1D1609_RS27970 | Not Available | Positive | 139185 - 140315 | 41316.2 |
| amino acid abc transporter atp-binding protein | At1D1609_RS27975 | Not Available | Positive | 140345 - 141103 | 28016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


