Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1609_RS27630 | Not Available | Positive | 73560 - 74237 | 24359.7 |
| i78 family peptidase inhibitor | At1D1609_RS27635 | Not Available | Negative | 74323 - 74616 | 10260.3 |
| flavodoxin family protein | At1D1609_RS27640 | Not Available | Negative | 74835 - 75419 | 20685.3 |
| doxx family protein | At1D1609_RS27645 | Not Available | Negative | 75518 - 75868 | 12481.7 |
| tetr/acrr family transcriptional regulator | At1D1609_RS27650 | Not Available | Positive | 76008 - 76580 | 21290.7 |
| tn3 family transposase | At1D1609_RS27655 | Not Available | Positive | 76606 - 76853 | 9522.8 |
| tn3 family transposase | At1D1609_RS27660 | Not Available | Positive | 77018 - 77167 | 5379.44 |
| tn3 family transposase | At1D1609_RS27665 | Not Available | Negative | 77238 - 77471 | 8566.12 |
| tn3 family transposase | At1D1609_RS27670 | Not Available | Positive | 77542 - 77862 | 11327.3 |
| quaternary amine abc transporter atp-binding protein | At1D1609_RS27675 | Not Available | Negative | 77984 - 79045 | 38502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


