Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | At1D1609_RS27380 | Not Available | Positive | 18092 - 20512 | 85548.4 |
| duf3391 domain-containing protein | At1D1609_RS30220 | Not Available | Positive | 20622 - 20744 | 4689.89 |
| hd-gyp domain-containing protein | At1D1609_RS27385 | Not Available | Positive | 20689 - 21585 | 32916.0 |
| tn3 family transposase | At1D1609_RS30100 | Not Available | Positive | 21677 - 21887 | 7714.36 |
| glycerol-3-phosphate dehydrogenase/oxidase | At1D1609_RS27390 | Not Available | Positive | 22129 - 23838 | 62501.6 |
| fggy-family carbohydrate kinase | At1D1609_RS27395 | Not Available | Positive | 23831 - 25318 | 53180.4 |
| abc transporter substrate-binding protein | At1D1609_RS27400 | Not Available | Positive | 25347 - 26627 | 46481.1 |
| carbohydrate abc transporter permease | At1D1609_RS27405 | Not Available | Positive | 26690 - 27562 | 32394.4 |
| carbohydrate abc transporter permease | At1D1609_RS27410 | Not Available | Positive | 27550 - 28365 | 29290.2 |
| abc transporter atp-binding protein | At1D1609_RS27415 | Not Available | Positive | 28377 - 29468 | 39849.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


