Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m24 family metallopeptidase | At1D1609_RS27075 | Not Available | Negative | 125633 - 126814 | 42713.9 |
| fructoselysine 6-kinase | At1D1609_RS27080 | Not Available | Negative | 126890 - 127708 | 29022.3 |
| sis domain-containing protein | At1D1609_RS27085 | Not Available | Negative | 127718 - 128740 | 37475.3 |
| laci family dna-binding transcriptional regulator | At1D1609_RS27090 | Not Available | Positive | 128885 - 129970 | 38721.3 |
| sdr family oxidoreductase | At1D1609_RS27095 | Not Available | Positive | 130228 - 130974 | 26713.0 |
| phosphogluconate dehydratase | At1D1609_RS27100 | Not Available | Positive | 131001 - 132821 | 64173.8 |
| aldo/keto reductase | At1D1609_RS27105 | Not Available | Positive | 132845 - 133909 | 38817.5 |
| laci family dna-binding transcriptional regulator | At1D1609_RS27110 | Not Available | Positive | 134026 - 135192 | 41672.8 |
| sdr family nad(p)-dependent oxidoreductase | At1D1609_RS27115 | Not Available | Positive | 135247 - 136023 | 27579.1 |
| abc transporter substrate-binding protein | At1D1609_RS27120 | Not Available | Negative | 136116 - 137627 | 55070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


