Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| age family epimerase/isomerase | At1D1609_RS27025 | Not Available | Negative | 115380 - 115976 | 21276.3 |
| age family epimerase/isomerase | At1D1609_RS27030 | Not Available | Negative | 115989 - 116692 | 25798.3 |
| abc transporter permease | At1D1609_RS27035 | Not Available | Negative | 116822 - 117643 | 30157.2 |
| abc transporter permease | At1D1609_RS27040 | Not Available | Negative | 117640 - 118524 | 31952.5 |
| polyamine abc transporter atp-binding protein | At1D1609_RS27045 | Not Available | Negative | 118529 - 119713 | 44028.6 |
| abc transporter substrate-binding protein | At1D1609_RS27050 | Not Available | Negative | 119766 - 120899 | 40923.5 |
| age family epimerase/isomerase | At1D1609_RS27055 | Not Available | Negative | 120927 - 121277 | 12119.3 |
| abc transporter permease subunit | At1D1609_RS27060 | Not Available | Negative | 121660 - 123441 | 63203.6 |
| abc transporter substrate-binding protein | At1D1609_RS27065 | Not Available | Negative | 123468 - 124532 | 38456.8 |
| abc transporter atp-binding protein | At1D1609_RS27070 | Not Available | Negative | 124554 - 125633 | 38326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


