Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1609_RS17495 | Not Available | Negative | 421586 - 422341 | 25686.1 |
| tonb-dependent receptor | At1D1609_RS17500 | Not Available | Negative | 422446 - 425151 | 97078.0 |
| hypothetical protein | At1D1609_RS29965 | Not Available | Negative | 425084 - 425404 | 11688.8 |
| fecr family protein | At1D1609_RS17505 | Not Available | Negative | 425364 - 426359 | 36453.5 |
| rna polymerase sigma factor | At1D1609_RS17510 | Not Available | Negative | 426471 - 426971 | 18878.7 |
| abc transporter atp-binding protein | At1D1609_RS17515 | Not Available | Negative | 427161 - 427913 | 26690.7 |
| feccd family abc transporter permease | At1D1609_RS17520 | Not Available | Negative | 427907 - 428974 | 37329.0 |
| abc transporter substrate-binding protein | At1D1609_RS17525 | Not Available | Negative | 428971 - 430110 | 42347.7 |
| abc transporter substrate-binding protein | At1D1609_RS17530 | Not Available | Negative | 430207 - 431340 | 41663.0 |
| class i sam-dependent methyltransferase | At1D1609_RS17535 | Not Available | Positive | 431454 - 432278 | 30370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


