Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1609 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1609
Gene Summary
Adenine Count
37209 bp
Thymine Count
37648 bp
Guanine Count
46427 bp
Cytosine Count
44833 bp
Genome Length
166117 bp
Protein-coding Genes
157 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trah family protein | At1D1609_RS26920 | Not Available | Positive | 96757 - 97386 | 22334.6 |
| hypothetical protein | At1D1609_RS26925 | Not Available | Positive | 97548 - 97727 | 6691.92 |
| proq/fino family protein | At1D1609_RS26930 | Not Available | Positive | 97862 - 98194 | 12676.9 |
| transcriptional repressor tram | At1D1609_RS26935 | Not Available | Positive | 98532 - 98840 | 11351.9 |
| autoinducer-binding transcriptional regulator trar | At1D1609_RS26940 | Not Available | Negative | 99319 - 100023 | 26735.0 |
| abc transporter atp-binding protein | At1D1609_RS26945 | Not Available | Negative | 100062 - 101645 | 56737.6 |
| abc transporter permease | At1D1609_RS26950 | Not Available | Negative | 101642 - 102457 | 29233.9 |
| abc transporter permease | At1D1609_RS26955 | Not Available | Negative | 102454 - 103458 | 35484.3 |
| abc transporter substrate-binding protein | At1D1609_RS26960 | Not Available | Negative | 103512 - 105068 | 56639.3 |
| homocysteine s-methyltransferase family protein | At1D1609_RS26965 | Not Available | Negative | 105095 - 106039 | 33241.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


