Pseudomonas sp. SWI6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SWI6 is characterized by having a single replicon, which is indicative of its genetic organization. The genomic information for this strain is cataloged under the accession number NZ_CP026676.1. Pseudomonas species are known for their metabolic versatility and ecological adaptability, often thriving in diverse environments. This particular strain, like others in the genus, may possess traits that enable it to survive in challenging conditions, although specific metabolic capabilities or ecological roles for SWI6 are not detailed in the provided data. The presence of a single replicon suggests a streamlined genetic structure, which could be advantageous for reproduction and adaptation. In general, Pseudomonas species are recognized for their ability to degrade a wide range of organic compounds, making them significant in bioremediation processes. The ecological insight drawn from the traits of Pseudomonas sp. SWI6 lies in its potential role in nutrient cycling and its application in environmental management. The metabolic flexibility that is characteristic of Pseudomonas spp. suggests that strains like SWI6 could be harnessed for the biodegradation of pollutants, contributing to ecosystem health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SWI6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SWI6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SWI6 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5038 genes

Non-Coding Genes

216 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorC4Q28_RS13020Not AvailablePositive2738975 - 273960722470.5
marr family winged helix-turn-helix transcriptional regulatorC4Q28_RS13025Not AvailablePositive2739772 - 274024517614.5
efflux rnd transporter periplasmic adaptor subunitC4Q28_RS13030Not AvailablePositive2740276 - 274146942848.8
dha2 family efflux mfs transporter permease subunitC4Q28_RS13035Not AvailablePositive2741466 - 274300155612.7
type ii secretion system f family proteinC4Q28_RS13040Not AvailableNegative2743044 - 274423443711.3
type ii secretion system major pseudopilin gspgC4Q28_RS13045Not AvailableNegative2744246 - 274467115441.4
lytic transglycosylase domain-containing proteinC4Q28_RS13050Not AvailablePositive2744857 - 274545321356.7
sensor histidine kinaseC4Q28_RS13055Not AvailablePositive2745572 - 274702953541.6
sensor histidine kinaseC4Q28_RS13060Not AvailablePositive2747322 - 274881555359.3
sigma-54-dependent transcriptional regulatorC4Q28_RS13065Not AvailablePositive2748784 - 275020853303.9

Displaying genes 2621 – 2630 of 5254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.