Cupriavidus metallidurans strain Ni-2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus metallidurans strain Ni-2 is a gram-negative, rod-shaped bacterium that exhibits a specialized habitat and is classified as mesophilic, with an optimal growth temperature of 30°C. This strain is characterized by its singular cell arrangement and is capable of mobility due to the presence of flagella. As a facultative anaerobe, Cupriavidus metallidurans strain Ni-2 can thrive in both aerobic and anaerobic environments, showcasing its adaptability. It is known to exist as a free-living organism, indicating that it does not rely on a host for survival. However, it has been identified in association with Homo sapiens and Pinus sylvestris, suggesting potential interactions with these hosts. The strain possesses a unique genomic structure, featuring four replicons, which may contribute to its adaptability and survival in diverse environments. While it has been associated with mild diseases in humans, the extent and nature of these health effects remain limited. The ecological insight provided by Cupriavidus metallidurans strain Ni-2 lies in its ability to interact with both human and plant hosts while maintaining a free-living lifestyle. Its versatility in habitat and metabolic flexibility may play a significant role in biogeochemical cycles, particularly in environments contaminated with heavy metals, where it has been observed to thrive. This adaptability underscores the potential of Cupriavidus metallidurans in bioremediation efforts and its significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus metallidurans
Strainstrain Ni-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Cupriavidus metallidurans strain Ni-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature30
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Homo sapiens, Pinus sylvestris
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus metallidurans strain Ni-2 plasmid unnamed2.

Gene Summary

Adenine Count

40466 bp

Thymine Count

39636 bp

Guanine Count

59383 bp

Cytosine Count

58215 bp

Genome Length

197700 bp

Protein-coding Genes

217 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseC3Z06_RS31480Not AvailablePositive125819 - 12661329643.9
site-specific integraseC3Z06_RS31485Not AvailablePositive126610 - 12810354456.4
hypothetical proteinC3Z06_RS31490Not AvailablePositive128100 - 13002871398.6
hypothetical proteinC3Z06_RS31495Not AvailablePositive130025 - 13050717156.5
lysr family transcriptional regulatorC3Z06_RS31500Not AvailableNegative130725 - 13159131542.2
phosphonate dehydrogenaseC3Z06_RS31505Not AvailableNegative131606 - 13261636589.6
phosphonate abc transporter, permease protein phneC3Z06_RS31510Not AvailableNegative132641 - 13343828639.7
phosphate/phosphite/phosphonate abc transporter substrate-binding proteinC3Z06_RS31515Not AvailableNegative133451 - 13431131117.7
phosphonate abc transporter atp-binding proteinC3Z06_RS31520Not AvailableNegative134314 - 13513229651.9
hu family dna-binding proteinC3Z06_RS31525Not AvailableNegative135909 - 13674231049.6

Displaying genes 151 – 160 of 479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Mild diseasesCausesPMC5615607

Displaying health effects 1 – 1 of 1 in total