Solidesulfovibrio carbinolicus strain DSM 3852

rod

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Solidesulfovibrio

Description

Solidesulfovibrio carbinolicus strain DSM 3852 is a rod-shaped bacterium notable for its unique genomic structure, which consists of four replicons. This characteristic may contribute to the organism's adaptability and metabolic diversity, although specific functions of these replicons are not detailed in the available data. The strain is classified under the genus Solidesulfovibrio, indicating its association with sulfate-reducing bacteria, which are known for their role in biogeochemical cycles, particularly in anaerobic environments. The genetic information for this strain is accessible through multiple accession numbers: NZ_CP026539.1, NZ_CP026542.1, NZ_CP026543.1, and NZ_CP026538.1. These accession numbers correspond to various components of its genomic data, which can be useful for researchers studying its metabolic pathways and ecological interactions. The rod shape of Solidesulfovibrio carbinolicus may facilitate its motility and colonization in specific environments, contributing to its ecological role, particularly in environments rich in organic compounds and sulfate. The strain's metabolic capabilities, typical of sulfate-reducing bacteria, suggest that it plays a significant role in the degradation of organic materials and the cycling of sulfur in its habitat. Understanding these traits can provide insights into the ecological functions of sulfate-reducing bacteria in sedimentary environments and their potential applications in bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusSolidesulfovibrio
SpeciesSolidesulfovibrio carbinolicus
Strainstrain DSM 3852

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solidesulfovibrio carbinolicus strain DSM 3852 chromosome,

Gene Summary

Adenine Count

797041 bp

Thymine Count

796578 bp

Guanine Count

1466341 bp

Cytosine Count

1464906 bp

Genome Length

4524866 bp

Protein-coding Genes

3929 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseC3Y92_RS09395Not AvailableNegative2106044 - 210667022168.8
m48 family metallopeptidaseC3Y92_RS09400Not AvailableNegative2106667 - 210744028193.2
putative transporterC3Y92_RS09405Not AvailableNegative2107454 - 210913057072.7
formate dehydrogenase accessory protein fdheC3Y92_RS09410Not AvailablePositive2109359 - 211024331926.5
formate dehydrogenase accessory sulfurtransferase fdhdC3Y92_RS09415Not AvailablePositive2110243 - 211095625220.5
molybdenum cofactor guanylyltransferaseC3Y92_RS09420Not AvailablePositive2110953 - 211156422023.8
gtp 3',8-cyclase moaaC3Y92_RS09425Not AvailablePositive2111561 - 211256836555.7
transposaseC3Y92_RS21470Not AvailablePositive2112654 - 21128607449.01
transposaseC3Y92_RS09430Not AvailablePositive2112806 - 211351325867.6
formate dehydrogenase-n subunit alphaC3Y92_RS09440Not AvailablePositive2113690 - 2116728112574.0

Displaying genes 1911 – 1920 of 4205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.