Solidesulfovibrio carbinolicus strain DSM 3852

rod

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Solidesulfovibrio

Description

Solidesulfovibrio carbinolicus strain DSM 3852 is a rod-shaped bacterium notable for its unique genomic structure, which consists of four replicons. This characteristic may contribute to the organism's adaptability and metabolic diversity, although specific functions of these replicons are not detailed in the available data. The strain is classified under the genus Solidesulfovibrio, indicating its association with sulfate-reducing bacteria, which are known for their role in biogeochemical cycles, particularly in anaerobic environments. The genetic information for this strain is accessible through multiple accession numbers: NZ_CP026539.1, NZ_CP026542.1, NZ_CP026543.1, and NZ_CP026538.1. These accession numbers correspond to various components of its genomic data, which can be useful for researchers studying its metabolic pathways and ecological interactions. The rod shape of Solidesulfovibrio carbinolicus may facilitate its motility and colonization in specific environments, contributing to its ecological role, particularly in environments rich in organic compounds and sulfate. The strain's metabolic capabilities, typical of sulfate-reducing bacteria, suggest that it plays a significant role in the degradation of organic materials and the cycling of sulfur in its habitat. Understanding these traits can provide insights into the ecological functions of sulfate-reducing bacteria in sedimentary environments and their potential applications in bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusSolidesulfovibrio
SpeciesSolidesulfovibrio carbinolicus
Strainstrain DSM 3852

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solidesulfovibrio carbinolicus strain DSM 3852 chromosome,

Gene Summary

Adenine Count

797041 bp

Thymine Count

796578 bp

Guanine Count

1466341 bp

Cytosine Count

1464906 bp

Genome Length

4524866 bp

Protein-coding Genes

3929 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseC3Y92_RS07170Not AvailableNegative1617473 - 161836330989.5
degq family serine endoproteaseC3Y92_RS07175Not AvailableNegative1618421 - 161988151030.3
Trna-argNot AvailableNot AvailablePositive1620273 - 1620349Not Available
crispr-associated helicase cas3'C3Y92_RS07185Not AvailablePositive1620670 - 162316892502.2
type i-c crispr-associated protein cas5cC3Y92_RS07190Not AvailablePositive1623182 - 162397329706.3
type i-c crispr-associated protein cas8c/csd1C3Y92_RS07195Not AvailablePositive1623979 - 162598874516.5
type i-c crispr-associated protein cas7/csd2C3Y92_RS07200Not AvailablePositive1625990 - 162684430899.4
crispr-associated protein cas4C3Y92_RS07205Not AvailablePositive1627306 - 162794724072.9
type i-c crispr-associated endonuclease cas1cC3Y92_RS07210Not AvailablePositive1627944 - 162896337717.9
crispr-associated endonuclease cas2C3Y92_RS07215Not AvailablePositive1628968 - 162925810933.2

Displaying genes 1521 – 1530 of 4205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.