Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | C1896_RS04805 | Not Available | Positive | 996888 - 998000 | 41419.2 |
| giy-yig nuclease family protein | C1896_RS04815 | Not Available | Negative | 998252 - 999442 | 43988.0 |
| dead/deah box helicase | C1896_RS04820 | Not Available | Negative | 999435 - 1001546 | 77875.1 |
| yhcg family protein | C1896_RS04825 | Not Available | Negative | 1001543 - 1002604 | 39815.8 |
| class i sam-dependent dna methyltransferase | C1896_RS04830 | Not Available | Negative | 1002601 - 1005360 | 102897.0 |
| helix-turn-helix domain-containing protein | C1896_RS04835 | Not Available | Negative | 1005841 - 1006371 | 19428.4 |
| helix-turn-helix transcriptional regulator | C1896_RS04840 | Not Available | Negative | 1006424 - 1006663 | 8849.57 |
| tyrosine-type recombinase/integrase | C1896_RS04845 | Not Available | Negative | 1007123 - 1008328 | 45660.2 |
| Tmrna,resume consensus sequence (at 88): tatagttgccaacgacga | Not Available | Not Available | Positive | 1008502 - 1008880 | Not Available |
| hypothetical protein | C1896_RS04855 | Not Available | Negative | 1009038 - 1009346 | 10563.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
