Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | C1896_RS00275 | Not Available | Positive | 53471 - 54496 | 37460.8 |
| dna-processing protein dpra | C1896_RS00280 | Not Available | Positive | 54581 - 55672 | 38104.1 |
| l-threonylcarbamoyladenylate synthase | C1896_RS00285 | Not Available | Positive | 55736 - 56293 | 20455.5 |
| quinone oxidoreductase family protein | C1896_RS00290 | Not Available | Negative | 56322 - 57299 | 34164.9 |
| oxygen-dependent coproporphyrinogen oxidase | C1896_RS00295 | Not Available | Positive | 57454 - 58371 | 34757.6 |
| shikimate dehydrogenase | C1896_RS00300 | Not Available | Positive | 58417 - 59235 | 29028.8 |
| nad(p)-dependent oxidoreductase | C1896_RS00305 | Not Available | Negative | 59243 - 59851 | 21581.7 |
| glycine zipper domain-containing protein | C1896_RS00310 | Not Available | Negative | 59867 - 60178 | 11793.8 |
| d-alanyl-d-alanine endopeptidase | C1896_RS00315 | Not Available | Positive | 60596 - 61537 | 34035.6 |
| alpha/beta-hydrolase family protein | C1896_RS00320 | Not Available | Negative | 61600 - 61803 | 7215.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
