Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferaseC1896_RS03640Not AvailableNegative756435 - 75756240963.8
ferredoxin--nadp reductaseC1896_RS03650Not AvailablePositive757786 - 75856229440.4
biofilm regulation diguanylate cyclase siadC1896_RS03655Not AvailableNegative758681 - 75946630049.8
biofilm regulation phosphoprotein siacC1896_RS03660Not AvailableNegative759476 - 75985314469.0
biofilm regulation protein kinase siabC1896_RS03665Not AvailableNegative759874 - 76041919904.7
biofilm regulation protein phosphatase siaaC1896_RS03670Not AvailableNegative760448 - 76243973152.3
energy-dependent translational throttle protein ettaC1896_RS03675Not AvailableNegative762592 - 76425961726.1
eal domain-containing proteinC1896_RS03680Not AvailablePositive764436 - 767483114039.0
serine hydroxymethyltransferaseC1896_RS03685Not AvailablePositive767608 - 76886145006.5
cache domain-containing proteinC1896_RS03690Not AvailablePositive769036 - 77038849276.3

Displaying genes 741 – 750 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.