Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malic enzyme-like nad(p)-binding protein | C1896_RS02590 | Not Available | Positive | 547208 - 548476 | 45117.3 |
| penicillin-binding protein 1a | C1896_RS02595 | Not Available | Negative | 548607 - 551057 | 89762.6 |
| pilus assembly protein pilm | C1896_RS02600 | Not Available | Positive | 551242 - 552306 | 37809.4 |
| type 4a pilus biogenesis protein piln | C1896_RS02605 | Not Available | Positive | 552306 - 552878 | 21436.9 |
| type 4a pilus biogenesis protein pilo | C1896_RS02610 | Not Available | Positive | 552875 - 553498 | 22929.6 |
| type 4a pilus biogenesis lipoprotein pilp | C1896_RS02615 | Not Available | Positive | 553495 - 554022 | 19251.2 |
| type iv pilus secretin pilq | C1896_RS02620 | Not Available | Positive | 554074 - 556185 | 75596.9 |
| shikimate kinase arok | C1896_RS02625 | Not Available | Positive | 556191 - 556736 | 20098.5 |
| 3-dehydroquinate synthase | C1896_RS02630 | Not Available | Positive | 556760 - 557851 | 39444.7 |
| aaa family atpase | C1896_RS02635 | Not Available | Positive | 557872 - 559365 | 53792.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
