Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | C1896_RS02240 | Not Available | Positive | 473250 - 474548 | 47262.9 |
| rida family protein | C1896_RS02245 | Not Available | Positive | 474523 - 474879 | 13005.6 |
| cupin domain-containing protein | C1896_RS02250 | Not Available | Positive | 474990 - 475538 | 19704.5 |
| c-type cytochrome | C1896_RS02255 | Not Available | Positive | 475702 - 476124 | 13993.8 |
| cupin domain-containing protein | C1896_RS02260 | Not Available | Positive | 476269 - 476787 | 18796.6 |
| xanthine phosphoribosyltransferase | C1896_RS02265 | Not Available | Negative | 476812 - 477384 | 20721.2 |
| duf1080 domain-containing protein | C1896_RS02270 | Not Available | Negative | 477575 - 478165 | 22598.4 |
| alpha-amylase family protein | C1896_RS02275 | Not Available | Negative | 478171 - 479790 | 61890.5 |
| alpha-amylase family glycosyl hydrolase | C1896_RS02280 | Not Available | Negative | 479793 - 481328 | 57590.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | C1896_RS02285 | Not Available | Positive | 481503 - 482522 | 37379.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
