Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr substrate-binding domain-containing proteinC1896_RS21700Not AvailablePositive4704255 - 470517534106.4
malonate transporter subunit madmC1896_RS21705Not AvailableNegative4705224 - 470598825631.2
malonate transporter subunit madlC1896_RS21710Not AvailableNegative4705992 - 470639013635.3
malonate decarboxylase subunit epsilonC1896_RS21715Not AvailableNegative4706520 - 470744632685.5
malonate decarboxylase holo-acp synthaseC1896_RS21720Not AvailableNegative4707443 - 470806322390.3
biotin-independent malonate decarboxylase subunit gammaC1896_RS21725Not AvailableNegative4708135 - 470892027977.4
biotin-independent malonate decarboxylase subunit betaC1896_RS21730Not AvailableNegative4708917 - 470978330642.4
malonate decarboxylase subunit deltaC1896_RS21735Not AvailableNegative4709776 - 471007510781.9
triphosphoribosyl-dephospho-coa synthaseC1896_RS21740Not AvailableNegative4710078 - 471095630228.3
malonate decarboxylase subunit alphaC1896_RS21745Not AvailableNegative4710956 - 471262361368.1

Displaying genes 4331 – 4340 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.