Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | C1896_RS21400 | Not Available | Positive | 4628653 - 4629564 | 32784.2 |
| atp-binding protein | C1896_RS21405 | Not Available | Positive | 4629666 - 4631465 | 67257.7 |
| sigma-54-dependent transcriptional regulator | C1896_RS21410 | Not Available | Positive | 4631467 - 4632858 | 50736.0 |
| c4-dicarboxylate trap substrate-binding protein dctp | C1896_RS21415 | Not Available | Positive | 4633241 - 4634236 | 36901.1 |
| trap transporter small permease | C1896_RS21420 | Not Available | Positive | 4634477 - 4635103 | 23104.2 |
| c4-dicarboxylate trap transporter large permease protein dctm | C1896_RS21425 | Not Available | Positive | 4635104 - 4636384 | 44710.4 |
| 2og-fe(ii) oxygenase | C1896_RS21430 | Not Available | Negative | 4636445 - 4637053 | 22821.1 |
| hypothetical protein | C1896_RS21435 | Not Available | Positive | 4637161 - 4637913 | 27246.1 |
| alpha/beta hydrolase | C1896_RS21440 | Not Available | Negative | 4637939 - 4638877 | 35378.5 |
| duf6436 domain-containing protein | C1896_RS21445 | Not Available | Positive | 4638964 - 4639581 | 21956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
