Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent response regulator transcription factor algb | C1896_RS20650 | Not Available | Positive | 4463974 - 4465320 | 49498.4 |
| kinb sensor domain-containing domain | C1896_RS20655 | Not Available | Positive | 4465317 - 4467104 | 66749.3 |
| duf1330 domain-containing protein | C1896_RS20660 | Not Available | Positive | 4467140 - 4467547 | 14907.8 |
| n-acetylmuramoyl-l-alanine amidase | C1896_RS20665 | Not Available | Negative | 4467557 - 4468333 | 28446.8 |
| ggdef domain-containing protein | C1896_RS20670 | Not Available | Negative | 4468478 - 4470334 | 69146.8 |
| endonuclease/exonuclease/phosphatase family protein | C1896_RS20675 | Not Available | Negative | 4470334 - 4471200 | 31956.4 |
| thiol:disulfide interchange protein dsba/dsbl | C1896_RS20680 | Not Available | Negative | 4471207 - 4471836 | 23306.1 |
| c-type cytochrome | C1896_RS20685 | Not Available | Negative | 4472018 - 4472650 | 21887.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | C1896_RS20690 | Not Available | Positive | 4472928 - 4473590 | 24170.0 |
| aminomethyl-transferring glycine dehydrogenase | C1896_RS20695 | Not Available | Negative | 4473648 - 4476524 | 104107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
