Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hdod domain-containing proteinC1896_RS20400Not AvailableNegative4397541 - 439840431749.2
type 1 glutamine amidotransferase domain-containing proteinC1896_RS20405Not AvailablePositive4398525 - 439906419268.9
class i sam-dependent rrna methyltransferaseC1896_RS20410Not AvailablePositive4399252 - 440044843962.8
lipaseC1896_RS20415Not AvailableNegative4400510 - 440135830033.3
dihydroxy-acid dehydrataseC1896_RS20420Not AvailablePositive4401832 - 440367065348.1
duf4153 domain-containing proteinC1896_RS20425Not AvailableNegative4403713 - 440544664508.4
uracil-xanthine permease family proteinC1896_RS20430Not AvailablePositive4406217 - 440760548582.1
nad(p)/fad-dependent oxidoreductaseC1896_RS20435Not AvailableNegative4407606 - 440872438692.1
metallophosphoesterase family proteinC1896_RS20440Not AvailablePositive4408829 - 440928416288.7
yitt family proteinC1896_RS20445Not AvailableNegative4409289 - 440999625564.6

Displaying genes 4071 – 4080 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.