Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinC1896_RS20350Not AvailableNegative4383974 - 4387528131921.0
bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family proteinC1896_RS20355Not AvailableNegative4387506 - 4390265101379.0
tetr/acrr family transcriptional regulatorC1896_RS20360Not AvailableNegative4390529 - 439119725378.4
coniferyl aldehyde dehydrogenaseC1896_RS20365Not AvailablePositive4391331 - 439276153042.1
twin-arginine translocation pathway signal proteinC1896_RS20370Not AvailablePositive4392786 - 439332219206.3
gmc family oxidoreductaseC1896_RS20375Not AvailablePositive4393364 - 439495957691.8
pantetheine-phosphate adenylyltransferaseC1896_RS20380Not AvailablePositive4395065 - 439554717968.8
yfhl family 4fe-4s dicluster ferredoxinC1896_RS20385Not AvailablePositive4395686 - 43959379231.91
hypothetical proteinC1896_RS20390Not AvailableNegative4396206 - 439654711650.3
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseC1896_RS20395Not AvailableNegative4396672 - 439748429931.5

Displaying genes 4061 – 4070 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.