Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C1896_RS19350 | Not Available | Negative | 4146175 - 4146993 | 30739.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | C1896_RS19355 | Not Available | Negative | 4146993 - 4147538 | 20502.0 |
| glucose-1-phosphate thymidylyltransferase rfba | C1896_RS19360 | Not Available | Negative | 4147538 - 4148419 | 32837.2 |
| dtdp-4-dehydrorhamnose reductase | C1896_RS19365 | Not Available | Negative | 4148426 - 4149415 | 36272.6 |
| dtdp-glucose 4,6-dehydratase | C1896_RS19370 | Not Available | Negative | 4149412 - 4150470 | 39543.2 |
| glycosyltransferase family 2 protein | C1896_RS19375 | Not Available | Negative | 4150474 - 4151445 | 35658.9 |
| putative hydroxymethylpyrimidine transporter cytx | C1896_RS19380 | Not Available | Negative | 4152310 - 4153578 | 44974.1 |
| is110 family transposase | C1896_RS19385 | Not Available | Positive | 4154189 - 4155160 | 36126.5 |
| phosphomethylpyrimidine synthase thic | C1896_RS19390 | Not Available | Negative | 4155202 - 4157082 | 69538.7 |
| tolc family outer membrane protein | C1896_RS19395 | Not Available | Positive | 4157485 - 4158936 | 53499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
